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17th Euromicro International Conference on
Parallel, Distributed and network-based Processing
(PDP 2009)

18-20 February 2009
Weimar, Germany
http://www.pdp2009.org

Special Session on
"Grid, Parallel and Distributed Bioinformatics Applications"

http://saturno.ima.ge.cnr.it/ima/personal/dagostino/bioapp2009.html

Paper submission deadline: August 1st, 2008

Bioinformatics is a discipline that aims to perform analysis of complex biological systems using a computer science approach, with the result of producing huge amounts of data. The major issue is represented by the need to turn this information into real knowledge, therefore the potential of exploiting parallel computing and distributed solutions in this field is clear. Porting applications and developing new systems on computer clusters improves performance when addressing genome wide analysis. Moreover, distributed technology such as Grid computing represents an emerging solution for establishing platforms to deal with data produced using new high throughput technology and gives researchers scalable solutions.

The aim of this special session is to present the latest efforts in parallel and distributed bioinformatics applications in grid computing. We are especially interested in parallel algorithms and libraries for biological analysis and tools to perform large scale computation on distributed platforms like the Grid.

Topics of interest include, but are not limited to:


This is the second edition of this special session, and we hope it becomes an annual forum for the exchange of ideas for Bioinformatics researchers and computer scientists both from industry and academia.


Supporting project: CNR-Bioinformatics

The aim of the Bioinformatics project is to establish a network of specific skills within CNR departments able to adequately respond to bioinformatics needs generated by CNR's projects.
This project will support the development of new approaches to analysis and management of genomic and proteomic data in biomedical, biotechnological, agro-industrial molecular design fields. This project aims to conduct coordinated research activities, aid technological transfer and to run training programmes, all of which will contribute to the development of new and advanced bioinformatics tools that will be made available to the entire national and international scientific community.



Session Chairs
Daniele D'Agostino, IMATI-CNR, Italy
Ivan Merelli, ITB-CNR, Italy

Program Committee:
Andrea Clematis, IMATI-CNR, Italy
Luciano Milanesi, ITB-CNR, Italy
Alessandro Orro, CILEA, Italy
Antonella Galizia, University of Genoa, Italy
Sandor Suhai, DKFZ, Germany
Federica Viti, ITB-CNR, Italy

Important dates
Papers due: August 1st, 2008
Acceptance notification: October 15th, 2008
Camera-ready versions: November 23rd, 2008

Submission guidelines
Authors should submit a full paper not exceeding 5000 words in length and including a 150-200 word abstract. To facilitate an anonymous reviewing process, the first page of the paper should contain only the title and abstract.
Proceedings will be published by IEEE Computer Society.

Paper Submission for Workshops/Special Sessions:
Papers submitted for the workshops or special sessions must be submitted through the conference submission system with an indication of the name of the workshop/special session. Papers must adhere to the formatting rules of the conference and will undergo the same review process as other papers submitted to the conference.

Authors of accepted papers are expected to register and present the paper at the Workshop.

Daniele D'Agostino
Institute for Applied Mathematics and Information Technology
Via De Marini 6, 16149 Genova, Italy
National Research Council
Email:
Tel: +39-010-6475686
Fax: +39-010-6475660

Ivan Merelli
Istitute for Biomedical Technologies
Via Fratelli Cervi 93, 20090 Segrate (MI), Italy
National Research Council
Email:
Tel: +39-02 26422600
Fax: +39-02 26422770